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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs200189957 chr1:184102860 G/C 0 474 15.68 17.73 34.1 KM Plot
THCA rs200192080 chr13:108883981 GC/G 7.82E-9 481 15.28 17.73 13.77 KM Plot
THCA rs2002111 chr13:108841956 G/A 2.05E-10 472 15.68 16.97 19.83 KM Plot
THCA rs200228645 chr1:119111512 C/G 3.64E-5 490 16.23 15.33 14.57 KM Plot
THCA rs200245702 chr10:82002681 T/G 8.32E-5 481 16.08 15.83 9.77 KM Plot
THCA rs200291107 chr7:16438436 C/G 2.83E-9 487 15.13 17.7 17.77 KM Plot
THCA rs2003065 chr11:57116707 A/T 0.000201 477 16.3 15.62 16.57 KM Plot
THCA rs200334508 chr2:29075166 T/G 8.83E-5 477 14.3 16.67 15.97 KM Plot
THCA rs200348637 chr3:56549022 G/A 5.9E-5 488 16.63 13.5 8.97 KM Plot
THCA rs200354251 chr2:29075169 T/A 8.83E-5 477 14.3 16.67 15.97 KM Plot
THCA rs200381493 chr11:26654065 GA/G 1.21E-5 484 15.9 16.62 8.38 KM Plot
THCA rs200391652 chr7:44337723 A/AAAAAC 1.09E-5 486 15.9 16.43 12.7 KM Plot
THCA rs2004738 chr17:2885808 C/T 0.000186 488 16.13 15.17 10.8 KM Plot
THCA rs200518063 chr11:96141574 C/T 4.45E-8 477 15.77 15.33 18.1 KM Plot
THCA rs200598747 chr1:91852266 TATTTAA/T 7.89E-6 489 15.65 17 17.77 KM Plot